Phyre Home Retrieve Phyre Job Id
Emailnfitzkee@chemistry.msstate.edu
DescriptionIsomerase
DateWed Jun 1 16:30:56 BST 2016
Unique Job ID6ef3ff44243acdf6
SequenceMVRVKASHIL ... Download FASTA
Job Typenormal
Job Expiry

Summary 

Top model
Image coloured by rainbow N → C terminus
Model dimensions (Å):X:38.631 Y:32.251 Z:31.193
Model (left) based on template d1jnsa_
Top template information
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
Confidence and coverage
Confidence: 99.9% Coverage: 96%
89 residues ( 96% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
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Sequence analysis 

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Secondary structure and disorder prediction [Show] 

Domain analysis [Show] 

Detailed template information [Hide] 

 

#
Template Alignment Coverage3D Model Confidence
% i.d. Template Information
1d1jnsa_



99.9 49
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
2d1m5ya3



99.9 40
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
3d2pv2a1



99.9 37
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
4d1eq3a_



99.9 41
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
5c1zk6A_



99.9 49
PDB header:isomerase
Chain: A: PDB Molecule:foldase protein prsa;
PDBTitle: nmr solution structure of b. subtilis prsa ppiase
6c3gpkA_



99.9 26
PDB header:isomerase
Chain: A: PDB Molecule:ppic-type peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of ppic-type peptidyl-prolyl cis-trans isomerase2 domain at 1.55a resolution.
7c2rqsA_



99.9 49
PDB header:isomerase
Chain: A: PDB Molecule:parvulin-like peptidyl-prolyl isomerase;
PDBTitle: 3d structure of pin from the psychrophilic archeon cenarcheaum2 symbiosum (cspin)
8d1pina2



99.9 52
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
9c2jzvA_



99.9 51
PDB header:isomerase
Chain: A: PDB Molecule:foldase protein prsa;
PDBTitle: solution structure of s. aureus prsa-ppiase
10c1f8aB_



99.9 48
PDB header:isomerase
Chain: B: PDB Molecule:peptidyl-prolyl cis-trans isomerase nima-interacting 1;
PDBTitle: structural basis for the phosphoserine-proline recognition by group iv2 ww domains
11c2kgjA_



99.9 32
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase d;
PDBTitle: solution structure of parvulin domain of ppid from e.coli
12d1j6ya_



99.9 54
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
13c1yw5A_



99.9 41
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl prolyl cis/trans isomerase;
PDBTitle: peptidyl-prolyl isomerase ess1 from candida albicans
14c2lj4A_



99.9 42
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase/rotamase, putative;
PDBTitle: solution structure of the tbpin1
15c2mntA_



99.9 34
PDB header:isomerase
Chain: A: PDB Molecule:tbpar42;
PDBTitle: solution structure of the ppiase domain of tbpar42
16c5htfA_



99.8 40
PDB header:chaperone
Chain: A: PDB Molecule:foldase protein prsa 1;
PDBTitle: crystal structure of prsa1 from listeria monocytogenes
17c1m5yB_



99.7 38
PDB header:isomerase, cell cycle
Chain: B: PDB Molecule:survival protein sura;
PDBTitle: crystallographic structure of sura, a molecular chaperone2 that facilitates outer membrane porin folding
18c2pv3B_



99.7 34
PDB header:isomerase
Chain: B: PDB Molecule:chaperone sura;
PDBTitle: crystallographic structure of sura fragment lacking the second2 peptidyl-prolyl isomerase domain complexed with peptide nftlkfwdifrk
19c4wo7A_



99.7 44
PDB header:isomerase
Chain: A: PDB Molecule:foldase protein prsa;
PDBTitle: crystal structure of prsa from bacillus subtilis
20c3nrkA_



99.7 13
PDB header:unknown function
Chain: A: PDB Molecule:lic12922;
PDBTitle: the crystal structure of the leptospiral hypothetical protein lic12922
21c5ez1B_



not modelled 99.7 42
PDB header:isomerase
Chain: B: PDB Molecule:putative peptidyl-prolyl cis-trans isomerase hp_0175;
PDBTitle: crystal structure of cell binding factor 2 from helicobacter pylori in2 complex with i2ca
22c3rfwA_



not modelled 99.7 47
PDB header:chaperone
Chain: A: PDB Molecule:cell-binding factor 2;
PDBTitle: the virulence factor peb4 and the periplasmic protein cj1289 are two2 structurally-related sura-like chaperones in the human pathogen3 campylobacter jejuni
23c3rgcB_



not modelled 99.2 9
PDB header:chaperone
Chain: B: PDB Molecule:possible periplasmic protein;
PDBTitle: the virulence factor peb4 and the periplasmic protein cj1289 are two2 structurally related sura-like chaperones in the human pathogen3 campylobacter jejuni
24d1vz0a1



not modelled 42.1 14
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:KorB DNA-binding domain-like
Family:KorB DNA-binding domain-like
25c3prdA_



not modelled 27.9 20
PDB header:chaperone, isomerase
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase;
PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26
26c1r71B_



not modelled 22.2 18
PDB header:transcription/dna
Chain: B: PDB Molecule:transcriptional repressor protein korb;
PDBTitle: crystal structure of the dna binding domain of korb in2 complex with the operator dna
27d2coba1



not modelled 21.9 16
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Psq domain
28d1dwka1



not modelled 21.5 14
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Cyanase N-terminal domain
29d1r71a_



not modelled 20.1 18
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:KorB DNA-binding domain-like
Family:KorB DNA-binding domain-like
30c2iv1J_



not modelled 18.0 14
PDB header:lyase
Chain: J: PDB Molecule:cyanate hydratase;
PDBTitle: site directed mutagenesis of key residues involved in the2 catalytic mechanism of cyanase
31c2elhA_



not modelled 15.3 24
PDB header:dna binding protein
Chain: A: PDB Molecule:cg11849-pa;
PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa
32c3bmbB_



not modelled 13.4 17
PDB header:rna binding protein
Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase;
PDBTitle: crystal structure of a new rna polymerase interacting2 protein
33c3mkyP_



not modelled 13.3 7
PDB header:dna binding protein/dna
Chain: P: PDB Molecule:protein sopb;
PDBTitle: structure of sopb(155-323)-18mer dna complex, i23 form
34d1nera_



not modelled 13.2 10
Fold:lambda repressor-like DNA-binding domains
Superfamily:lambda repressor-like DNA-binding domains
Family:Phage repressors
35c3pr9A_



not modelled 11.6 20
PDB header:chaperone
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase;
PDBTitle: structural analysis of protein folding by the methanococcus jannaschii2 chaperone fkbp26
36c2lgoA_



not modelled 10.8 11
PDB header:isomerase
Chain: A: PDB Molecule:fkbp;
PDBTitle: solution nmr structure of a fkbp-type peptidyl-prolyl cis-trans2 isomerase from giardia lamblia, seattle structural genomics center3 for infectious disease target gilaa.00840.a
37d1q1ca2



not modelled 10.1 14
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
38c1m98A_



not modelled 10.1 23
PDB header:unknown function
Chain: A: PDB Molecule:orange carotenoid protein;
PDBTitle: crystal structure of orange carotenoid protein
39d1ix5a_



not modelled 9.7 20
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
40c3vthA_



not modelled 9.7 25
PDB header:transferase
Chain: A: PDB Molecule:hydrogenase maturation factor;
PDBTitle: crystal structure of full-length hypf in the phosphate- and2 nucleotide-bound form
41d1fd9a_



not modelled 8.9 19
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
42c2phcB_



not modelled 8.8 36
PDB header:structural genomics, unknown function
Chain: B: PDB Molecule:uncharacterized protein ph0987;
PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii
43c4dipD_



not modelled 8.7 17
PDB header:isomerase
Chain: D: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp14;
PDBTitle: crystal structure of human peptidyl-prolyl cis-trans isomerase fkbp14
44c1vz0B_



not modelled 8.7 15
PDB header:nuclear protein
Chain: B: PDB Molecule:chromosome partitioning protein parb;
PDBTitle: chromosome segregation protein spo0j from thermus2 thermophilus
45c3mmlD_



not modelled 8.5 36
PDB header:hydrolase
Chain: D: PDB Molecule:allophanate hydrolase subunit 1;
PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436
46c2pn0D_



not modelled 8.5 17
PDB header:transcription
Chain: D: PDB Molecule:prokaryotic transcription elongation factor
PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea
47c3mkzU_



not modelled 8.0 7
PDB header:dna-binding protein/dna
Chain: U: PDB Molecule:protein sopb;
PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
48d1kt1a2



not modelled 7.7 22
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
49c1q6uA_



not modelled 7.5 12
PDB header:isomerase
Chain: A: PDB Molecule:fkbp-type peptidyl-prolyl cis-trans isomerase fkpa;
PDBTitle: crystal structure of fkpa from escherichia coli
50c3hefB_



not modelled 7.5 26
PDB header:viral protein
Chain: B: PDB Molecule:gene 1 protein;
PDBTitle: crystal structure of the bacteriophage sf6 terminase small2 subunit
51c2zp2B_



not modelled 7.2 45
PDB header:transferase inhibitor
Chain: B: PDB Molecule:kinase a inhibitor;
PDBTitle: c-terminal domain of kipi from bacillus subtilis
52c2p4vA_



not modelled 7.0 28
PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor greb;
PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution
53d1bw6a_



not modelled 6.9 21
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:Homeodomain-like
Family:Centromere-binding
54c2pbcD_



not modelled 6.7 23
PDB header:isomerase
Chain: D: PDB Molecule:fk506-binding protein 2;
PDBTitle: fk506-binding protein 2
55d2etna2



not modelled 6.6 25
Fold:FKBP-like
Superfamily:FKBP-like
Family:GreA transcript cleavage factor, C-terminal domain
56c4b1pJ_



not modelled 6.5 35
PDB header:transferase/dna
Chain: J: PDB Molecule:rna polymerase subunit 13;
PDBTitle: archaeal rnap-dna binary complex at 4.32ang
57d2ppna1



not modelled 6.5 15
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
58d2phcb1



not modelled 6.5 36
Fold:Cyclophilin-like
Superfamily:Cyclophilin-like
Family:PH0987 C-terminal domain-like
59d1yata_



not modelled 6.4 23
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
60d1e0ga_



not modelled 6.4 24
Fold:LysM domain
Superfamily:LysM domain
Family:LysM domain
61c4aybQ_



not modelled 6.4 35
PDB header:transferase
Chain: Q: PDB Molecule:dna-directed rna polymerase;
PDBTitle: rnap at 3.2ang
62d1y7ma2



not modelled 6.3 15
Fold:LysM domain
Superfamily:LysM domain
Family:LysM domain
63d1uhfa_



not modelled 6.1 12
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
64d1kt0a3



not modelled 6.1 8
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
65d1kt1a3



not modelled 6.0 8
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
66c5b8iC_



not modelled 6.0 13
PDB header:hydrolase
Chain: C: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: crystal structure of calcineurin a and calcineurin b in complex with2 fkbp12 and fk506 from coccidioides immitis rs
67c3hkzY_



not modelled 5.9 27
PDB header:transferase
Chain: Y: PDB Molecule:dna-directed rna polymerase subunit 13;
PDBTitle: the x-ray crystal structure of rna polymerase from archaea
68c2jwxA_



not modelled 5.8 6
PDB header:apoptosis, isomerase
Chain: A: PDB Molecule:fk506-binding protein 8 variant;
PDBTitle: solution structure of the n-terminal domain of human fkbp382 (fkbp38ntd)
69c2k8iA_



not modelled 5.7 22
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase;
PDBTitle: solution structure of e.coli slyd
70c1hxvA_



not modelled 5.5 24
PDB header:chaperone
Chain: A: PDB Molecule:trigger factor;
PDBTitle: ppiase domain of the mycoplasma genitalium trigger factor
71d1hxva_



not modelled 5.5 24
Fold:FKBP-like
Superfamily:FKBP-like
Family:FKBP immunophilin/proline isomerase
72c5fcuG_



not modelled 5.3 31
PDB header:viral protein/immune system
Chain: G: PDB Molecule:clade a/e 93th057 hiv-1 gp120 core;
PDBTitle: crystal structure of the inner domain of clade a/e hiv-1 gp120 in2 complex with the adcc-potent rhesus macaque antibody jr4
73d1e6ha_



not modelled 5.3 31
Fold:SH3-like barrel
Superfamily:SH3-domain
Family:SH3-domain
74d2akja1



not modelled 5.3 8
Fold:Ferredoxin-like
Superfamily:Nitrite/Sulfite reductase N-terminal domain-like
Family:Duplicated SiR/NiR-like domains 1 and 3
75c3o5fA_



not modelled 5.2 26
PDB header:isomerase
Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase fkbp5;
PDBTitle: fk1 domain of fkbp51, crystal form vii
76d1y0ua_



not modelled 5.1 13
Fold:DNA/RNA-binding 3-helical bundle
Superfamily:"Winged helix" DNA-binding domain
Family:ArsR-like transcriptional regulators
77c4rugA_



not modelled 5.1 15
PDB header:protein binding
Chain: A: PDB Molecule:slit-robo rho gtpase-activating protein 2;
PDBTitle: cyrstal structure of slit-robo rho gtpase-activating protein 22 fragment

Binding site prediction 

The top ranking model of your protein (d1jnsa_ 99.9% confidence) has been submitted to the 3DLigandSite server to predict potential binding sites.

Results will appear here when complete