Boot Camp 2021, Day 3 Materials

The final day's handouts and audio are linked below. Please download non-PDF files using Firefox or Edge. Chrome will not work.

• Session 11 - Bioinformatics and BLAST Searching
  • Session 11 Slides
  • DNA and Protein Sequences
  • Homology Model: 1pin.pdb
  • Homology Model: swiss.pdb
  • Homology Model: phyre2.pdb
  • Homology Model: itasser.pdb
  • PyMOL Project: Aligned Homology Models
• Session 12 - Programming in Python
  • Session 12 Slides
  • Python Template
  • Python Code for Replacing B-factor Column
  • Python Code for Fitting a Folding Model to Fluorescence Data
  • GB3 PDB File (2OED.pdb)
  • B-factors for 2OED
  • Raw Fluorescence Data for Fitting
• Session 13 - Literature Searching and EndNote
  • Session 13 Slides
  • Session 13 Handout
  • Example ENCase.txt file
  • Curated Journals Terms List